Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs73338123 | chr14:96056455 | G/A | 1.09E-6 | 211 | 14.83 | 29.5 | 9.77 | KM Plot |
| KIRP | rs7345455 | chr20:25987155 | G/A | 7.31E-9 | 209 | 18.65 | 13.13 | 1.17 | KM Plot |
| KIRP | rs734692 | chr18:7477500 | A/T | 5.33E-12 | 214 | 17.17 | 14.1 | 10.83 | KM Plot |
| KIRP | rs73515406 | chr9:106725910 | C/G | 1.26E-8 | 211 | 16.53 | 10.2 | 10.55 | KM Plot |
| KIRP | rs73515412 | chr9:106725927 | T/C | 1.26E-8 | 211 | 16.53 | 10.2 | 10.55 | KM Plot |
| KIRP | rs73515413 | chr9:106726123 | C/T | 1.26E-8 | 211 | 16.53 | 10.2 | 10.55 | KM Plot |
| KIRP | rs73515414 | chr9:106726329 | C/T | 1.26E-8 | 211 | 16.53 | 10.2 | 10.55 | KM Plot |
| KIRP | rs73515417 | chr9:106726542 | T/A | 1.26E-8 | 211 | 16.53 | 10.2 | 10.55 | KM Plot |
| KIRP | rs73543108 | chr16:47424956 | T/C | 7.92E-8 | 214 | 17.2 | 12.63 | 12.85 | KM Plot |
| KIRP | rs73544000 | chr19:40468256 | C/T | 1.92E-8 | 211 | 16.53 | 13.82 | 4.62 | KM Plot |
| KIRP | rs73545909 | chr19:40473322 | G/A | 1.92E-8 | 212 | 16.73 | 12.62 | 4.62 | KM Plot |
| KIRP | rs73545934 | chr19:40480550 | T/C | 1.83E-8 | 212 | 16.97 | 12.62 | 4.62 | KM Plot |
| KIRP | rs73551233 | chr16:47647244 | T/C | 7.92E-8 | 212 | 17.6 | 12.9 | 12.85 | KM Plot |
| KIRP | rs73669687 | chr8:30044522 | G/A | 1.08E-6 | 212 | 16.43 | 17.52 | 0.33 | KM Plot |
| KIRP | rs73669692 | chr8:30075362 | A/T | 9.93E-7 | 212 | 15.88 | 17 | 0.33 | KM Plot |